Information for 8-GCCAAATAGCCGG (Motif 8)

C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
Reverse Opposite:
A G T C A G T C C T A G A C T G G A T C A G C T G T C A G A C T A G C T A C G T A C T G A C T G A G T C
p-value:1e-12
log p-value:-2.948e+01
Information Content per bp:1.806
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 21.4bp
Average Position of motif in Background46.0 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATAGCCGG
CGTGCCAAG-------
 A C G T A C G T A C G T C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAATAGCCGG
TGCCAA--------
 A C G T C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCAAATAGCCGG
NCCAATTANC---
 C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C A C G T A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCAAATAGCCGG
ACTAATTAGC---
 C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C A C G T A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAATAGCCGG-
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0109.1_Nkx1-1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATAGCCGG-
TGCGCTAATTAGTGGGA
 A C G T A C G T A C G T C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G A C G T
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATAGCCGG
GGTGCCAAGT------
 A C G T A C G T A C G T C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCAAATAGCCGG
GCCAATTAAC---
 C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T A C G T

GBX2/MA0890.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCAAATAGCCGG
ACCAATTAGC---
 C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCAAATAGCCGG
-CCAATTAA----
 C T A G T A G C A G T C C G T A C T G A C G T A A C G T C T G A C A T G A G T C A G T C C T A G A C T G
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T A C G T