Information for 10-GCACACGTGTGCGGGG (Motif 31)

A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.405e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.5 +/- 26.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0043.1_Max_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCACACGTGTGCGGGG
TGACCACGTGGTCGGG-
 A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCACACGTGTGCGGGG
-AACACGTGTT-----
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCACACGTGTGCGGGG
--GCACGTGT------
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCACACGTGTGCGGGG
-NVCACGTG-------
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCACACGTGTGCGGGG
---CACGTG-------
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCACACGTGTGCGGGG
-NACACGTGCN-----
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCACACGTGTGCGGGG
-GHCACGTG-------
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCACACGTGTGCGGGG
--TCACGTGC------
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCACACGTGTGCGGGG
-GNCACGTG-------
 A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCACACGTGTGCGGGG
NNACCACGTGGT-----
 A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C T G A G T C A C T G A C T G A C T G A C T G
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T