Information for 16-CCAAGAGTTA (Motif 29)

G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A
Reverse Opposite:
A C G T G T C A C G T A A G T C A G C T A G T C G C A T C G A T T C A G A C T G
p-value:1e-6
log p-value:-1.582e+01
Information Content per bp:1.762
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif47.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.2 +/- 26.7bp
Average Position of motif in Background51.3 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGAGTTA
NTGCCCANNGGTNA
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCAAGAGTTA-
--AAAAGTCAA
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCAAGAGTTA--
--AGGTGTGAAM
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAAGAGTTA--
--ACTAGTTAAC
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A A C G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAAGAGTTA-------
NTTTTAGTTAACNNAGN
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAAGAGTTA
--AGGTGTGA
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

JDP2/MA0655.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCAAGAGTTA-
--ATGAGTCAT
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A A C G T
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCAAGAGTTA--
-NATGAGTCACN
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A A C G T A C G T
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAAGAGTTA-------
NNNTTAGTTAACTNANN
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAAGAGTTA
--AGGTGTGA
 G T A C A G T C C G T A C G T A C T A G C T G A A C T G C G A T C A G T C G T A
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A