Information for 18-GCCAGGCCCCGCC (Motif 26)

A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C
Reverse Opposite:
A T C G A T C G A G T C T C A G A T C G C A T G A C T G G A T C G T A C C A G T T C A G A T C G T A G C
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.738
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif400.3
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets59.2 +/- 26.4bp
Average Position of motif in Background47.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCCAGGCCCCGCC---
--CAGGCCNNGGCCNN
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GCCAGGCCCCGCC---
----GGCCCCGCCCCC
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCCAGGCCCCGCC----
---NAGCCCCGCCCCCN
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCAGGCCCCGCC
-CTAGGCCT----
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGCCCCGCC
GGCCACRCCCMK--
 A C G T A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCAGGCCCCGCC------
--TAAGCCACGCCCCCTTT
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCCAGGCCCCGCC
-CNAGGCCT----
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCCAGGCCCCGCC-------
-----GCCCCGCCCCCTCCC
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCAGGCCCCGCC-----
---NRGCCCCRCCCHBNN
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCAGGCCCCGCC-----
--TCGACCCCGCCCCTAT
 A T C G A T G C A G T C G T C A A C T G C T A G T G A C G T A C A T G C A G T C T A C G A T G C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T