Information for 16-TAAAATTTTAYWG (Motif 19)

A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G
Reverse Opposite:
G A T C G C T A C T A G G C A T C T G A C G T A G C T A T G C A C G A T G A C T C A G T G C A T T C G A
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.533
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif51.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.7 +/- 20.3bp
Average Position of motif in Background46.1 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TAAAATTTTAYWG----
NTNAATTTTATTGNATT
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TAAAATTTTAYWG----
-NNANTTTTATTGGNNN
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAAAATTTTAYWG----
-NNAATTTTATTGGNTN
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TAAAATTTTAYWG-----
--NAATTTTATTACCNNN
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TAAAATTTTAYWG--
-----TTTTATTRGN
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TAAAATTTTAYWG-
----NTTTTATTGG
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAAAATTTTAYWG----
-TNAATTTTATTACCTN
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0056.1_Hoxa9/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAAAATTTTAYWG----
ANTAATTTTATGGCCGN
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TAAAATTTTAYWG-
----NTTTTATTGG
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAAATTTTAYWG-
AAAATTGTTATGAA
 A G C T C G T A G T C A C T G A G C T A A C G T C G A T G C A T G A C T C G T A G A T C C G A T C T A G A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A