Information for 6-TCTGTAATAAACCACT (Motif 16)

C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
Reverse Opposite:
C G T A T C A G A C G T T A C G A C T G A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C T G C G T A
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 20.4bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
---GTCATAAAAN---
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
---GCAATAAAA----
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
--GGTAATAAAAA---
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
TAGGTAATAAAATTCA
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
--NGYCATAAAWCH--
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCTGTAATAAACCACT
AAAGGTAATAAAATTT-
 A C G T C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
-AAGCCATAAAA----
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
---GCAATAAAAA---
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
--NCYAATAAAA----
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTGTAATAAACCACT
---CCAATAAAAA---
 C G A T A G T C A C G T A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A G T A C A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T