Information for 12-ACAGCCAATGGAG (Motif 15)

G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
Reverse Opposite:
A G T C C A G T G T A C G A T C G T C A G A C T C G A T A C T G A T C G G T A C C G A T A T C G C G A T
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.649
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.53%
Number of Background Sequences with motif645.5
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets51.6 +/- 26.4bp
Average Position of motif in Background50.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCAATGGAG
CACAGN--------
 A C G T G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACAGCCAATGGAG
-CAGCC-------
 G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCAATGGAG
ACTAGCCAATCA--
 A C G T G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAGCCAATGGAG
BCAGACWA-----
 G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACAGCCAATGGAG
--TGCCAA-----
 G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACAGCCAATGGAG
--AGCCAATCGG-
 G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCAATGGAG
GTCAGCANNTN---
 A C G T G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCAATGGAG
NACAGGAAAT----
 A C G T G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCAATGGAG
NACAGGAAAT----
 A C G T G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAGCCAATGGAG
CGTGCCAAG----
 G C T A A T G C C G T A A C T G T A G C G T A C C G T A C T G A C A G T C T A G C A T G G T C A T C A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T