Information for 5-CGCCCTCCAGCCA (Motif 7)

A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G A G T C A C G T C T A G A C T G G C T A A C T G C A T G A C T G G T A C A C T G
p-value:1e-13
log p-value:-3.197e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 20.4bp
Average Position of motif in Background65.2 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CGCCCTCCAGCCA-
------BCAGACWA
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGCCCTCCAGCCA-
------CCAGACAG
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCCAGCCA
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCCAGCCA
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCAGCCA-----
-TACGCCCCGCCACTCTG
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CGCCCTCCAGCCA-
--------TGCCAA
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CGCCCTCCAGCCA
-------CAGCC-
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCCCTCCAGCCA-----
-CAAATCCAGACATCACA
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGCCCTCCAGCCA--
------CGTGCCAAG
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGCCCTCCAGCCA----
-----ACTAGCCAATCA
 A G T C C A T G A G T C G A T C A G T C C G A T A G T C A G T C C G T A A C T G A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A