Information for 19-SGCACASRCACRC (Motif 37)

A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C
Reverse Opposite:
A C T G A G C T A T C G A C G T A T C G A G T C A T G C G A C T A C T G A G C T A C T G A G T C A T G C
p-value:1e-7
log p-value:-1.778e+01
Information Content per bp:1.711
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif180.9
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets52.3 +/- 28.4bp
Average Position of motif in Background48.2 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:SGCACASRCACRC-
--------CACGCA
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-SGCACASRCACRC-
AGCAACAGCCGCACC
 A C G T A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SGCACASRCACRC------
---AGCGGCACACACGCAA
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SGCACASRCACRC------
---CGAAGCACACAAAATA
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:SGCACASRCACRC--
-----TBGCACGCAA
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:SGCACASRCACRC-
----CRCCCACGCA
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T
A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:SGCACASRCACRC-
--YCCGCCCACGCN
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T
A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

EGR3/MA0732.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---SGCACASRCACRC
CTACGCCCACGCACT-
 A C G T A C G T A C G T A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:SGCACASRCACRC
---CCAGGAACAG
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:SGCACASRCACRC---
------GGCACGCGTC
 A T C G C T A G T G A C T C G A A G T C C T G A T A C G C T A G A T G C C G T A A T G C C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C