p-value: | 1e-7 |
log p-value: | -1.806e+01 |
Information Content per bp: | 1.849 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.62% |
Number of Background Sequences with motif | 72.8 |
Percentage of Background Sequences with motif | 0.16% |
Average Position of motif in Targets | 28.5 +/- 17.1bp |
Average Position of motif in Background | 48.6 +/- 27.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCTCTAGAG NSCACTYVAV |
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ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCCTCTAGAG-- BCNGGTTCTAGANCN |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCTCTAGAG---- ATAACCACTTGAAAATT |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCTCTAGAG RSCACTYRAG |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCTCTAGAG--- TAAGCCACTTGAAATT |
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ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCTCTAGAG-- GRTGMTRGAGCC |
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SMAD3/MA0795.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCTCTAGAG- -CGTCTAGACA |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCCTCTAGAG--- TAAGCCACTTGAAATT |
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CTCF/MA0139.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCCTCTAGAG------- TGGCCACCAGGGGGCGCTA |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCTCTAGAG-------- TGGCCACCAGGTGGCACTNT |
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