Information for 12-ATGACCTTAAACTCCT (Motif 25)

C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 25.7bp
Average Position of motif in Background50.4 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATGACCTTAAACTCCT
ATGACCTTGAA-----
 C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATGACCTTAAACTCCT
GCTGACCTTGAACTN--
 A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGACCTTAAACTCCT
-TGACCTTGACCT---
 C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATGACCTTAAACTCCT
ATGACCTTGA------
 C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATGACCTTAAACTCCT
NATGACCTTGA------
 A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGACCTTAAACTCCT
-TGACCTTGACCT---
 C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGACCTTAAACTCCT
-TGACCTTTGACCCC-
 C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGACCTTAAACTCCT
NTGACCTTGA------
 C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATGACCTTAAACTCCT
NNNNATGACCTTGANTN---
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGACCTTAAACTCCT
-TGACCTTGAT-----
 C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T