Information for 14-AGAGGCGCCAGAG (Motif 23)

C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G C T A C T G C T A G A G T C C T A G A G T C A G T C C G A T A G T C A C G T
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 24.8bp
Average Position of motif in Background60.3 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAGGCGCCAGAG
TTTGGCGCCAAA-
 C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGCGCCAGAG-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCGCCAGAG--
CCTTCGGCGCCAAAAGG
 A C G T A C G T C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAGGCGCCAGAG-
--AGGTGHCAGACA
 C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAGGCGCCAGAG--
--AGGTGNCAGACAG
 C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAGGCGCCAGAG-
----ATGCCAGACN
 C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGAGGCGCCAGAG-
----GAGSCCGAGC
 C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCGCCAGAG
TGACANARRCCAGRC
 A C G T A C G T C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGCGCCAGAG
NAGNTCTCGCGAGAN
 A C G T A C G T C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGAGGCGCCAGAG
---CGTGCCAAG-
 C G T A A C T G C G T A A C T G T A C G A G T C A C T G A G T C A G T C C T G A A C T G C G T A A C T G
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T