Information for 4-CCAGCTTTCGCCA (Motif 5)

A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
Reverse Opposite:
A G C T A T C G C A T G T A G C C A T G T C G A T C G A C T G A T A C G A G T C G C A T A C T G T C A G
p-value:1e-12
log p-value:-2.864e+01
Information Content per bp:1.642
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.1 +/- 24.3bp
Average Position of motif in Background72.1 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTTTCGCCA
TGCAGCTGTCCCT-
 A C G T A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTTTCGCCA
NNGCAGCTGTC----
 A C G T A C G T A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTTTCGCCA
NNGCAGCTGTT----
 A C G T A C G T A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAGCTTTCGCCA
CCAGCTGTTN---
 A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAGCTTTCGCCA
-CAGCTGTT----
 A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCAGCTTTCGCCA---
CCGTCTTCCCCCTCAC
 A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCAGCTTTCGCCA
CAAGCTT------
 A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTTTCGCCA
NAHCAGCTGD-----
 A C G T A C G T A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTTTCGCCA
AGCAGCTGCTNN--
 A C G T A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAGCTTTCGCCA
NCAGCTGCTG---
 A G T C G T A C C G T A T A C G A G T C A G C T A G C T A G C T G T A C A T C G G A T C T A G C T C G A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T