Information for 2-CAGGTGGCGCCVCGCG (Motif 4)

A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C A C T G A C G T A C T G A C T G G T A C A T C G A T G C A G T C C G T A A T G C A G T C A G C T A C T G
p-value:1e-13
log p-value:-3.038e+01
Information Content per bp:1.826
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 24.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGGCGCCVCGCG
NNNNTTGGCGCCGANNN
A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGGCGCCVCGCG
NNNNTTGGCGCCGANNN
A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCGCCVCGCG
NNCAGGTGNN--------
A C G T A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGGTGGCGCCVCGCG
VCAGCTGBNN-------
A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGGCGCCVCGCG
SDGCAGGTGCNS-------
A C G T A C G T A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGGCGCCVCGCG
AACAGGTGT---------
A C G T A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCGCCVCGCG
NNCAGGTGTN--------
A C G T A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCGCCVCGCG
NNCAGGTGCG--------
A C G T A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAGGTGGCGCCVCGCG
NNVVCAGCTGBN--------
A C G T A C G T A C G T A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGCGCCVCGCG
AACAGGTGNT--------
A C G T A C G T A G T C C T G A C T A G A T C G A C G T A C T G A T C G A T G C A C T G A G T C A G T C T C G A T G A C A C T G A G T C A C T G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T