p-value: | 1e-13 |
log p-value: | -3.157e+01 |
Information Content per bp: | 1.792 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 61.8 +/- 21.6bp |
Average Position of motif in Background | 32.6 +/- 9.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGDAHATGVAGDTCAG -----ATCAAGGTCA- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGDAHATGVAGDTCAG --TATAAGTAGGTCAA |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGDAHATGVAGDTCAG ---ATATGCAAATNNN |
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POU1F1/MA0784.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGDAHATGVAGDTCAG --AATATGCAAATTAG |
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Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGDAHATGVAGDTCAG ---ATATGCAAAT--- |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGDAHATGVAGDTCAG ----WATGCAAATGAG |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGDAHATGVAGDTCAG -----AAYTAGGTCA- |
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Vdr/MA0693.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGDAHATGVAGDTCAG GAGTTCATTGAGTTCA- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AGDAHATGVAGDTCAG ------TCAAGGTCAN |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AGDAHATGVAGDTCAG ------TCAAGGTCAT |
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