Information for 24-SCGRKGCTYTRTARAS (Motif 33)

A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G
Reverse Opposite:
A T G C A C G T A G C T A C G T C G T A A G C T C G T A C T A G C G T A A C T G A G T C G T A C A G C T G T A C A C T G A T G C
p-value:1e-3
log p-value:-9.024e+00
Information Content per bp:1.827
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.0 +/- 2.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:SCGRKGCTYTRTARAS
-NNNNNNCTTTTATAN
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G
A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:SCGRKGCTYTRTARAS
-NNNNNNCTTTTATAN
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G
A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:SCGRKGCTYTRTARAS
----GNCTATAAAAGG
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:SCGRKGCTYTRTARAS
------CTTTGT----
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:SCGRKGCTYTRTARAS---
-------WWTRTAAACAVG
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:SCGRKGCTYTRTARAS
----NGCTN-------
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:SCGRKGCTYTRTARAS--
------WWATRTAAACAN
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:SCGRKGCTYTRTARAS---
--NNNVCTGWGYAAACASN
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:SCGRKGCTYTRTARAS--
------NGYCATAAAWCH
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:SCGRKGCTYTRTARAS-
-----GCTATTTATAGC
 A T C G A G T C A C T G T C A G A C T G A C T G A G T C A C G T A G T C A C G T C T G A A C G T C G T A C T G A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C