Information for 10-GCTAAGTGCC (Motif 27)

A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C
Reverse Opposite:
A C T G A C T G A T G C G T C A A G T C A C G T A C G T C T G A A C T G A G T C
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.918
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif38.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets37.2 +/- 28.1bp
Average Position of motif in Background49.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCTAAGTGCC
-TTAAGTGC-
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCTAAGTGCC
-TTAAGTGGN
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCTAAGTGCC-
-TTAAGTGCTT
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C G T
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCTAAGTGCC
-CTAATKGV-
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTAAGTGCC
-TTAAGTGGT
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCTAAGTGCC-
-TTRAGTGSYK
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTAAGTGCC
NTCAAGTGGN
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTAAGTGCC-
-CCAACTGCCA
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCTAAGTGCC----
CGACCAACTGCCATGC
 A C G T A C G T A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTAAGTGCC
GCTAATTGCT
 A C T G G T A C A G C T C G T A C G T A A C T G A C G T A T C G A G T C A G T C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T