Information for 19-CCTAGGCTAGGAG (Motif 26)

A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
Reverse Opposite:
A G T C A G C T A G T C G T A C A C G T C G T A A C T G A T G C A G T C A G C T C T G A A C T G A C T G
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.843
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 22.1bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTAGGCTAGGAG
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTAGGCTAGGAG
--TWGTCTGV---
 A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCTAGGCTAGGAG
TGCCCAGNHW-----
 A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGGCTAGGAG
ATGCCCGGGCATGT--
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCTAGGCTAGGAG
ATTGCCTGAGGCAAT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CCTAGGCTAGGAG
AGCCTCAGGCA-----
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CCTAGGCTAGGAG
CGCCTCAGGCA-----
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CCTAGGCTAGGAG
SCCTSAGGSCAW---
 A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---CCTAGGCTAGGAG
AGCCTCAGGCA-----
 A C G T A C G T A C G T A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CCTAGGCTAGGAG
--AGGCCTAG---
 A G T C A G T C A G C T C T G A A C T G A T C G A G T C A C G T C G T A A C T G A C T G T C G A C T A G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T