Information for 15-TAAAKCMAAKAWRCSA (Motif 18)

A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G A G T C C G T A C G A T G T C A A C G T A C G T A C G T C T A G G T C A A G C T A C G T A C G T C G T A
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.4 +/- 9.6bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TAAAKCMAAKAWRCSA
--AAACAAACATTC--
 A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAAAKCMAAKAWRCSA
-WAAGTAAAYA-----
 A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TAAAKCMAAKAWRCSA
NGYCATAAAWCH---------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TAAAKCMAAKAWRCSA
GGCCATAAATCAC--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TAAAKCMAAKAWRCSA
-TAATCAATTA-----
 A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TAAAKCMAAKAWRCSA
GGCCATAAATCA---------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TAAAKCMAAKAWRCSA
GGCCATAAATCA---------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAAAKCMAAKAWRCSA
-AAAGTAAACA-----
 A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAAAKCMAAKAWRCSA
-TAAGTAAACAAA---
 A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAAAKCMAAKAWRCSA
GCCATAAATCA---------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T A G T C G T C A C G T A C G T A A C G T C G T A C G A T C T A G A G T C A T G C C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T