Information for 2-DSYHATAAAV (Motif 2)

C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A
Reverse Opposite:
A C G T A C G T A C G T C G A T C G T A A G C T C G A T C T G A T A C G G A T C
p-value:1e-42
log p-value:-9.688e+01
Information Content per bp:1.658
Number of Target Sequences with motif193.0
Percentage of Target Sequences with motif24.16%
Number of Background Sequences with motif3805.2
Percentage of Background Sequences with motif8.14%
Average Position of motif in Targets50.8 +/- 24.0bp
Average Position of motif in Background50.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:DSYHATAAAV--
NGYCATAAAWCH
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:DSYHATAAAV
NCYAATAAAA
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.93
Offset:1
Orientation:forward strand
Alignment:DSYHATAAAV
-GCAATAAAA
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.93
Offset:1
Orientation:forward strand
Alignment:DSYHATAAAV-
-CCAATAAAAA
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A A C G T
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.92
Offset:0
Orientation:forward strand
Alignment:DSYHATAAAV-
GGTAATAAAAA
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.92
Offset:1
Orientation:forward strand
Alignment:DSYHATAAAV-
-CCAATAAAAA
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.91
Offset:0
Orientation:forward strand
Alignment:DSYHATAAAV
NGCAATTAAA
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:DSYHATAAAV
CCYMATAAAA
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.90
Offset:1
Orientation:forward strand
Alignment:DSYHATAAAV-
-CCAATAAAAC
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.90
Offset:1
Orientation:forward strand
Alignment:DSYHATAAAV-
-GTCATAAAAN
 C T A G A T G C A G C T G C T A C T G A A C G T G C T A C G T A C G T A T G C A A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T