Information for 4-CAAWCTGCCCTTW (Motif 6)

A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
Reverse Opposite:
C G T A G T C A C G T A C T A G A C T G C T A G A G T C C G T A T A C G C G T A A C G T A C G T A C T G
p-value:1e-16
log p-value:-3.693e+01
Information Content per bp:1.851
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 28.8bp
Average Position of motif in Background56.2 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CAAWCTGCCCTTW-
----CTGACCTTTG
 A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAAWCTGCCCTTW
----CTGCCCGCA
 A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAAWCTGCCCTTW
GGTCANNGTGACCTN-
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAAWCTGCCCTTW
AGGNCANNGTGACCT--
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAAWCTGCCCTTW
-----TGACCTYA
 A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAAWCTGCCCTTW
----GTGACCTT-
 A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAWCTGCCCTTW
CGACCAACTGCCGTG-
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAAWCTGCCCTTW
CGACCAACTGCCATGC
 A C G T A C G T A C G T A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAAWCTGCCCTTW----
-----TGACCTTTNCNT
 A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAWCTGCCCTTW----
-NNNGTGACCTTTGNNN
 A G T C C G T A C G T A C G A T A G T C A C G T A C T G A G T C G T A C A G T C A C G T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A