Information for 4-ACACAWAAASCAGTTA (Motif 5)

C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A
Reverse Opposite:
A G C T C G T A C G T A A T G C A C G T A C T G T A C G G A C T C G A T C G A T C G A T A C G T C A T G C G A T A T C G C G A T
p-value:1e-17
log p-value:-3.947e+01
Information Content per bp:1.716
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 23.1bp
Average Position of motif in Background24.4 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0004.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA-----
----CATAACCACTTAACAAC
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA----
----AAAAACCAATTAAGAA
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA----
----AACAACCAATTAATTC
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA-----
----CTTAACCACTTAAGGAT
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA-
-------AAGCACTTAA
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.62
Offset:8
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA-
--------ACCACTTAA
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.62
Offset:8
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA-
--------ACCACTTAA
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.60
Offset:9
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA-
---------GCACTTAA
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA----
----CAAAACCAATTAATTT
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACACAWAAASCAGTTA-----
-----TAAGCCACTTAACATT
 C G T A A T G C C G T A G A T C G T C A G C T A G C T A C G T A C G T A A T G C A G T C C G T A A T C G G C A T G A C T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T