Information for 22-CTCCCTTAGA (Motif 30)

A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
p-value:1e-4
log p-value:-9.843e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 26.3bp
Average Position of motif in Background41.2 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTCCCTTAGA
-BCMATTAG-
 A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCCCTTAGA-
-TTCCKNAGAA
 A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T
A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCCCTTAGA---
-TNCCTTTGATGT
 A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCCCTTAGA---
---CCTTTGAWGT
 A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCCCTTAGA-----
-TNCCTTTGATCTTN
 A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTTAGA------
AATCCCTTTGATCTATC
 A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCCCTTAGA-----
TATCATTAGAACGCT
 A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTTAGA------
ATTTCCTTTGATCTATA
 A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCCCTTAGA---
---CCTTTGATGT
 A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCCCTTAGA----
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A