Information for 3-TTATCATTTAATCAGA (Motif 3)

A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
Reverse Opposite:
G A C T G A T C C G A T C T A G G C T A A C G T A C G T C G T A C T G A G T C A A C G T T C A G C G T A A G C T C G T A C G T A
p-value:1e-21
log p-value:-4.933e+01
Information Content per bp:1.771
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.3 +/- 19.4bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUXA/MA0884.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTATCATTTAATCAGA
--CTAATTTAATCAA-
 A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
A C G T A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTATCATTTAATCAGA
NTNTTCTTATCAGTNTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTATCATTTAATCAGA
--ATGATCGAATCAAA
 A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
A C G T A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

PH0091.1_Lhx1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTATCATTTAATCAGA
NNTTATTAATTAATNCN-
 A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G A C G T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTATCATTTAATCAGA
---TAATTTAATCA--
 A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
A C G T A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTATCATTTAATCAGA
AGTTTTTAATTAATTTG-
 A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTATCATTTAATCAGA
CTTATCTCHMCATCT--
 A C G T A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTATCATTTAATCAGA
AATATTAATAAAGA---
 A C G T A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTATCATTTAATCAGA-
TAATTAATTAATAACTA
 A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTATCATTTAATCAGA
-NWTAAYCYAATCAWN
 A C G T A C G T C T G A A C G T A G T C C G T A A C G T A G C T A C G T G T C A C G T A C A G T A G T C C G T A C T A G C T G A
A C G T C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T