Information for 18-GCAGGACATC (Motif 28)

A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
Reverse Opposite:
C T A G G T C A A G C T A C T G A C G T A T G C A T G C C G A T A C T G T G A C
p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.844
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif99.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets45.4 +/- 27.8bp
Average Position of motif in Background52.7 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGACATC
NACAGGAAAT-
 A C G T A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCAGGACATC
NACAGGAAAT-
 A C G T A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAGGACATC--
-AAGGATATNTN
 A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGACATC
ANCAGGATGT-
 A C G T A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGACATC-
NDCAGGAARTNN
 A C G T A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGGACATC
ACAGGAAGTG
 A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGGACATC-----
--ATGACATCATCNN
 A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGACATC
TRAGGTCA--
 A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAGGACATC
AACAGGAAGT-
 A C G T A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAGGACATC
--AGGTCA--
 A C T G G T A C C G T A A T C G T A C G C G T A A G T C C T G A A C G T G A T C
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T