Information for 12-AAAGCCTGGC (Motif 23)

T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C
Reverse Opposite:
A C T G A T G C A G T C C T G A A C T G A C T G T A G C G A C T A C G T A C G T
p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.838
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif177.3
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets38.1 +/- 24.2bp
Average Position of motif in Background53.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAAGCCTGGC
-AGGCCTNG-
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAAGCCTGGC
-AAGCTTG--
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAGCCTGGC
-AGGCCTAG-
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGCCTGGC---
CAAAGGCGTGGCCAG
 A C G T A C G T T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGCCTGGC
TAATCCCN--
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAGCCTGGC----
CAGGCCNNGGCCNN
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAAGCCTGGC--
--GGTCTGGCAT
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AAAGCCTGGC---
----NTTGGCANN
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AAAGCCTGGC-
-----TTGGCA
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAGCCTGGC
ACATCCTGNT
 T G C A C G T A C T G A A T C G A G T C A G T C A G C T A C T G T A C G T G A C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T