Information for 10-AGTATTTGGC (Motif 18)

C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C
Reverse Opposite:
C T A G G A T C A G T C C G T A C G T A C G T A G A C T C T G A A G T C A G C T
p-value:1e-10
log p-value:-2.514e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif138.3
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets45.4 +/- 27.3bp
Average Position of motif in Background53.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AGTATTTGGC-
-----TTGGCA
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:AGTATTTGGC---
----NTTGGCANN
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGTATTTGGC---
---NNTTGGCANN
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTATTTGGC
-NTAATTGG-
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T

PH0024.1_Dlx5/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGTATTTGGC----
GGGGTAATTAGCTCTG
 A C G T A C G T C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C A C G T A C G T A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGTATTTGGC
-NTAATTGG-
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T

Nobox/MA0125.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGTATTTGGC
--TAATTGGT
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C
A C G T A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTATTTGGC
NTTAATTGNN
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C
C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C

GBX1/MA0889.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTATTTGGC
GCTAATTAGN
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C
T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTATTTGGC
-NTAATTGN-
 C T G A T C A G A G C T C T G A C G A T A C G T A C G T C T A G C T A G A G T C
A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T