Information for 9-TTTTTATTGGCTTTST (Motif 13)

A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
Reverse Opposite:
G T C A T A C G C T G A C T G A G T C A C T A G A G T C G A T C C G T A C G T A G C A T C G T A C G T A G T C A C T G A C G T A
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 15.4bp
Average Position of motif in Background42.4 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTATTGGCTTTST
NNAATTTTATTGGNTN---
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTTTATTGGCTTTST
TTTTTATTGG------
 A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTTATTGGCTTTST
NTTTTATTGG------
 A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTTTATTGGCTTTST
NTTTTATTGG------
 A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTATTGGCTTTST
NNANTTTTATTGGNNN---
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTATTGGCTTTST
NTNAATTTTATTGNATT---
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTTTTATTGGCTTTST
--NTTATTGATTTTTT
 A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
A C G T A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTTTATTGGCTTTST
-TTTTATTRGN-----
 A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTTTTATTGGCTTTST
-TTTTATKRGG-----
 A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTATTGGCTTTST
NTNTTGTTGTTTGTN----
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A C G A T A C G T C T A G C T A G G A T C A C G T A G C T A G C T A T G C A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T A C G T A C G T