Information for 7-BCTGAGGBAGCGGCGC (Motif 11)

A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G G T A C A G T C A T C G A T G C C G A T T A G C A T G C A G T C A C G T A G T C G T C A A T C G T G C A
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.766
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 30.3bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.58
Offset:11
Orientation:reverse strand
Alignment:BCTGAGGBAGCGGCGC---
-----------GGCGCGCT
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:BCTGAGGBAGCGGCGC-------
------AGCTCGGCGCCAAAAGC
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:BCTGAGGBAGCGGCGC-
-----GGGGGCGGGGCC
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:BCTGAGGBAGCGGCGC-------
------CCTTCGGCGCCAAAAGG
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:BCTGAGGBAGCGGCGC
----------CGGAGC
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:BCTGAGGBAGCGGCGC
----RGKGGGCGGAGC
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:BCTGAGGBAGCGGCGC----
--------TTTGGCGCCAAA
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:BCTGAGGBAGCGGCGC
-GGGNGGGGGCGGGGC
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:BCTGAGGBAGCGGCGC------
------NNNGGGGCGCCCCCNN
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:BCTGAGGBAGCGGCGC---
--NAAGGGGGCGTGGCTTN
 A C G T A T G C A C G T C T A G C G T A C T A G A T C G A C T G C G T A A T C G A T G C A C T G A C T G A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A