p-value: | 1e-6 |
log p-value: | -1.441e+01 |
Information Content per bp: | 1.776 |
Number of Target Sequences with motif | 16.0 |
Percentage of Target Sequences with motif | 2.22% |
Number of Background Sequences with motif | 226.5 |
Percentage of Background Sequences with motif | 0.47% |
Average Position of motif in Targets | 43.0 +/- 29.1bp |
Average Position of motif in Background | 49.9 +/- 28.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 1 |
Score: | 0.85 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTTGAGAGG-- -CTTGAGTGGCT |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 2 |
Score: | 0.81 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTTGAGAGG- -BTBRAGTGSN |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 3 |
Score: | 0.80 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTGAGAGG-- --TTGAGTGSTT |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 4 |
Score: | 0.79 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTTGAGAGG- -CTYRAGTGSY |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 5 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTGAGAGG----- NTNNTTAAGTGGNTNAN |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 6 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTTGAGAGG-- --TTRAGTGSYK |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 7 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTGAGAGG- --TTAAGTGGT |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 8 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTTGAGAGG --TTGACAGC |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 9 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTGAGAGG- --TTAAGTGGN |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTGAGAGG----- NTNNTTAAGTGGTTANN |
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