Information for 17-CCMCMCGACCCTGACC (Motif 30)

G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C
Reverse Opposite:
C T A G A T C G C G A T A T G C C G T A A C T G T A C G A T C G A G C T A T G C T A C G C A G T A C T G A C G T A C T G C T A G
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.698
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif35.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.5 +/- 29.6bp
Average Position of motif in Background49.6 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCMCMCGACCCTGACC-
-----TGACCTTGACCT
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCMCMCGACCCTGACC-
-----TGACCTTGACCT
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:CCMCMCGACCCTGACC-
-----------TGACCT
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:CCMCMCGACCCTGACC---
-----------TGACCTYA
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCMCMCGACCCTGACC
GCAGCCAAGCGTGACN
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:CCMCMCGACCCTGACC---
-----------TGACCYCT
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCMCMCGACCCTGACC
----AAGACCCYYN--
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C
A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CCMCMCGACCCTGACC
---------GCTGTG-
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:CCMCMCGACCCTGACC----
----------CTGACCTTTG
 G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCMCMCGACCCTGACC
TCACCCCGCCCCAAATT
 A C G T G A T C G T A C T G C A T A G C G T C A A G T C A T C G C T G A A T G C A G T C A G T C C G A T A T C G C G T A A T G C A G T C
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T