p-value: | 1e-8 |
log p-value: | -2.034e+01 |
Information Content per bp: | 1.725 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 3.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 52.0 +/- 28.7bp |
Average Position of motif in Background | 52.1 +/- 23.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGCCCTTTAGCTAGTG TGACCTTTNCNT---- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGCCCTTTAGCTAGTG CTGACCTTTG------- |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGCCCTTTAGCTAGTG NNNNTGACCTTTNNNN---- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGCCCTTTAGCTAGTG NNNGTGACCTTTGNNN---- |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCCCTTTAGCTAGTG TGACCTTGACCT---- |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCCCTTTAGCTAGTG TGACCTTTGCCCTA-- |
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Nr5a2/MA0505.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGCCCTTTAGCTAGTG GCTGACCTTGAACTN--- |
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HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCCCTTTAGCTAGTG TGGACTTTGNNCTNTG |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGCCCTTTAGCTAGTG TGACCTTTGCCCCA-- |
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Nr2f6/MA0677.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCCCTTTAGCTAGTG TGACCTTTGACCTN-- |
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