Information for 1-TGTTTAHYYT (Motif 2)

A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T
Reverse Opposite:
C G T A C T A G T C G A C T A G A G C T G T C A C G T A C G T A A G T C G T C A
p-value:1e-19
log p-value:-4.486e+01
Information Content per bp:1.755
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif428.3
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets57.2 +/- 25.2bp
Average Position of motif in Background49.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXF2/MA0030.1/Jaspar

Match Rank:1
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTAHYYT--
NTTGTTTACGTTNN
 A C G T A C G T A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T A C G T A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:TGTTTAHYYT
TGTTTATTT-
 A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TGTTTAHYYT
TGTTTACTTT
 A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TGTTTAHYYT
TGTTTACTTT
 A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGTTTAHYYT
TGTTTAC---
 A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTAHYYT
CBTGTTTAYAWW
 A C G T A C G T A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----TGTTTAHYYT-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTAHYYT--
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTAHYYT--
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TGTTTAHYYT
TRTTTACTTW
 A C G T C T A G C G A T A C G T A C G T C T G A G A T C A G C T A G T C A C G T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A