Information for 12-CTCGACCAGSKGCTCC (Motif 19)

A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
Reverse Opposite:
A C T G A C T G G C T A A C T G A T G C G T A C A T G C A G T C A C G T A C T G A C T G C A G T G T A C A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 12.6bp
Average Position of motif in Background46.6 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCGACCAGSKGCTCC--
-CTCAGCAGCTGCTACTG
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCGACCAGSKGCTCC
----NNCAGGTGCG--
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCGACCAGSKGCTCC
----NNCAGGTGTN--
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCGACCAGSKGCTCC
--NNVVCAGCTGBN--
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTCGACCAGSKGCTCC
----AGCAGCTGCT--
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCGACCAGSKGCTCC
----AGCAGCTGCTNN
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCGACCAGSKGCTCC
---NNVCAGCTGB---
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTCGACCAGSKGCTCC
---NNACAGCTGC---
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCGACCAGSKGCTCC
-----CCAGCTGTTN-
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCGACCAGSKGCTCC
---CAGCAGCTGN---
A G T C A C G T A G T C C A T G G T C A A G T C A G T C C G T A A C T G A T C G A C G T A T C G A G T C C G A T T G A C A G T C
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T