Information for 13-AAGRTGAGCAAGG (Motif 22)

G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G
Reverse Opposite:
A G T C G A T C C G A T A C G T A C T G A G T C A G C T A G T C C G T A A G T C A G T C A C G T A C G T
p-value:1e-7
log p-value:-1.684e+01
Information Content per bp:1.833
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif28.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.0 +/- 24.2bp
Average Position of motif in Background50.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxk1/MA0852.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGRTGAGCAAGG--
AAAATGTAAACAAACAG
 A C G T A C G T G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGRTGAGCAAGG--
AAAATGTAAACAAACAG
 A C G T A C G T G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGRTGAGCAAGG
CAGGTAAGTAT--
 G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGRTGAGCAAGG--
AAAAAGTAAACAAACAC
 A C G T A C G T G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGRTGAGCAAGG--
AAAAAGTAAACAAACAC
 A C G T A C G T G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXF2/MA0030.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGRTGAGCAAGG
CAAACGTAAACAAT-
 A C G T A C G T G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGRTGAGCAAGG--
TAAATGTAAACAAAGGT
 A C G T A C G T G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGRTGAGCAAGG
--GTTGCGCAAT-
 G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G
A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGRTGAGCAAGG----
NNNNTGAGCACTGTNNG
 G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAGRTGAGCAAGG-
---GTCAGCANNTN
 G T C A C G T A C T A G C T A G A C G T C T A G C T G A A C T G G T A C C G T A C G T A C A T G C T A G A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T