Information for 12-GGGCTGCGAA (Motif 21)

A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T G T A C T A C G A G T C C G T A A C T G G T A C A G T C A G T C
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.885
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.9 +/- 23.0bp
Average Position of motif in Background42.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGCTGCGAA--
--CSTGGGAAAD
 A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGCTGCGAA
WDNCTGGGCA
 A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGCTGCGAA
--GCTGTG--
 A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCTGCGAA
-NGCTN----
 A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GGGCTGCGAA
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGGCTGCGAA
AAGGTGTKAA
 A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGCTGCGAA
TWGTCTGV---
 A C G T A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGGCTGCGAA-
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGCTGCGAA-
CTTCTGGGAAA
 A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGGCTGCGAA
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C G T A C T G A T G C A C T G C T G A C G T A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T