Information for 5-CCARGGGKACGCC (Motif 8)

A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G G T A C A C T G A C G T T G A C A G T C A G T C A G T C A G T C G C A T A C T G A C T G
p-value:1e-11
log p-value:-2.652e+01
Information Content per bp:1.914
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.1 +/- 19.5bp
Average Position of motif in Background74.1 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCARGGGKACGCC-----
-TTNGGGTACGCCNNANN
 A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCARGGGKACGCC----
--NNGGCCACGCCTTTN
 A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCARGGGKACGCC
TCCCCTGGGGAC---
 A C G T A C G T A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCARGGGKACGCC-----
-NNNNGGTACCCCCCANN
 A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCARGGGKACGCC------
--AAGCATACGCCCAACTT
 A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCARGGGKACGCC
---TGGGGA----
 A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCARGGGKACGCC
TTGCCATGGCAACN--
 A C G T A C G T A C G T A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCARGGGKACGCC-
NNNNTTGGGCACNNCN
 A C G T A C G T A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCARGGGKACGCC
GGCACCCAGGGGTGC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCARGGGKACGCC--
---GGGGGAATCCCC
 A G T C A G T C C G T A T C A G A C T G A C T G A C T G A C T G C G T A A G T C A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C