Information for 4-ACAWAGYAMTATK (Motif 6)

C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
Reverse Opposite:
G T A C C G T A G A C T C G T A A C T G A C G T C T A G A G T C A C G T C G A T A C G T A C T G A C G T
p-value:1e-13
log p-value:-3.028e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 14.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ACAWAGYAMTATK
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACAWAGYAMTATK
ACAAAG-------
 C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ACAWAGYAMTATK
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACAWAGYAMTATK
ACAAAGGNBCCT-
 C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACAWAGYAMTATK
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAWAGYAMTATK
VRRACAAWGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAWAGYAMTATK
GGAACAAAGR------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAWAGYAMTATK--
-NNTNNCAATATTAG
 C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G A C G T A C G T
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAWAGYAMTATK--
-NNTNNCAATATTAG
 C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G A C G T A C G T
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAWAGYAMTATK
AAAACAAAGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A G T A C A C G T C G T A A C G T A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T