Information for 1-AAGAACACACTGT (Motif 3)

C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A T A C G A C G T A C T G A G C T A C T G A C G T A G C T G T A C A G C T A G C T
p-value:1e-15
log p-value:-3.471e+01
Information Content per bp:1.798
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.9 +/- 18.0bp
Average Position of motif in Background49.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AAGAACACACTGT--
AAGAACATWHTGTTC
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAGAACACACTGT--
VAGRACAKNCTGTBC
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAGAACACACTGT--
VAGRACAKWCTGTYC
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AAGAACACACTGT---
NAGAACAGNCTGTNCT
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGAACACACTGT---
NAGNACANNNTGTNCT
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGAACACACTGT----
GGGAACACAATGTTCCC
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGAACACACTGT----
GGGTACATAATGTTCCC
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGAACACACTGT----
NGGTACACNGTGTTCCC
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGAACACACTGT
AAAAATAACAAACGG-
 A C G T A C G T A C G T C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGAACACACTGT
AAGGTCAC-----
 C T G A C T G A A C T G T C G A C G T A G T A C C T G A G T A C C G T A A G T C G A C T A C T G A G C T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T