Information for 11-RTDCATTCTG (Motif 22)

T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G C T G A C G T A A C G T A C T G G A C T C T G A A G T C
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.816
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif410.8
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets58.8 +/- 29.4bp
Average Position of motif in Background50.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:RTDCATTCTG--
--ACATCCTGNT
 T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RTDCATTCTG-
-CACATTCCAT
 T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RTDCATTCTG----
CAATGCATTGTGGGTA
 A C G T A C G T T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RTDCATTCTG-
-CACATTCCAT
 T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RTDCATTCTG---
---CCTGCTGAGH
 T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RTDCATTCTG-----
TCNCCTGCTGNGNNN
 T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RTDCATTCTG--
--ACTTCCTGTT
 T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RTDCATTCTG-----
NNTCCTGCTGTGNNN
 T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RTDCATTCTG---
VAGRACAKNCTGTBC
 A C G T A C G T T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RTDCATTCTG---
VAGRACAKWCTGTYC
 A C G T A C G T T C A G A G C T C G T A G T A C C G T A C G A T G A C T A G T C A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C