Information for 2-CCCTGGCCCTYCATCC (Motif 2)

A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G T G C A G A C T A C T G T C G A C T G A A C T G A C T G A T C G G T A C A T G C G T C A A C T G A C T G C T A G
p-value:1e-15
log p-value:-3.618e+01
Information Content per bp:1.795
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 16.3bp
Average Position of motif in Background30.5 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGCCCTYCATCC
TGCCTGCGYCMCCTT--
A C G T A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGCCCTYCATCC
GAGCCCTTGTCCCTAA---
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCCTGGCCCTYCATCC
--CTGTTCCTGG----
A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCCTGGCCCTYCATCC
---TGACCYCT-----
A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGCCCTYCATCC
TGTCGTGACCCCTTAAT-
A C G T A C G T A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGCCCTYCATCC
NNCNTGACCCCGCTCT-
A C G T A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCCTGGCCCTYCATCC
---TGACCT-------
A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGCCCTYCATCC
TCACCCCGCCCCAAATT--
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGCCCTYCATCC
GCCCCGCCCCCTCCC--
A C G T A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCCTGGCCCTYCATCC
-GCTGTG---------
A G T C A G T C A G T C A C G T A T C G C A T G A T G C A G T C A G T C A G C T A G C T A G T C C T G A A C G T A G T C A G T C
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T