Information for 1-CCACTRTGTATGCAGT (Motif 1)

G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T
Reverse Opposite:
C T G A T A G C A G C T C T A G A G T C C G T A C G A T C G T A G A T C C T G A A G C T C T G A C A T G A C G T A C T G C A T G
p-value:1e-18
log p-value:-4.214e+01
Information Content per bp:1.710
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 25.6bp
Average Position of motif in Background43.3 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCACTRTGTATGCAGT-
--CCATTGTATGCAAAT
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCACTRTGTATGCAGT-----
----NSTGTTTRCWCAGBNNN
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCACTRTGTATGCAGT
-----GHATATKCAT-
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCACTRTGTATGCAGT--
---ANATTTTTGCAANTN
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCACTRTGTATGCAGT----
---NTNTATGTGCACATNNN
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCACTRTGTATGCAGT-----
----AAAATATGCATAATAAA
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCACTRTGTATGCAGT-
--TCCATGTTTACTTTG
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T A C G T
A C G T A C G T G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCACTRTGTATGCAGT
------TGTTTAC---
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCACTRTGTATGCAGT
------TGTTTAC---
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCACTRTGTATGCAGT
------TGTTTACH--
 G A T C T A G C G T C A G T A C G A C T C T G A A G C T C A T G A C G T C G T A A C G T A C T G A G T C C T G A A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T