Information for 3-CGCDGGSYGCGGG (Motif 7)

A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G
Reverse Opposite:
G A T C T G A C A G T C A C T G A T G C C T A G T A C G T A G C A G T C G C T A A C T G A G T C A T C G
p-value:1e-11
log p-value:-2.647e+01
Information Content per bp:1.744
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif3.97%
Number of Background Sequences with motif477.5
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets55.6 +/- 26.7bp
Average Position of motif in Background49.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CENPB/MA0637.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGCDGGSYGCGGG
TTCGTNNNANGCGGG
 A C G T A C G T A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCDGGSYGCGGG
NNGCNCTGCGCGGC
 A C G T A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCDGGSYGCGGG--
GGGNGGGGGCGGGGC
 A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGCDGGSYGCGGG---
NNNAAGGGGGCGGGNNN
 A C G T A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CGCDGGSYGCGGG
-------TGCGTG
 A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

POL001.1_MTE/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CGCDGGSYGCGGG-
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCDGGSYGCGGG--
-TCAGNGAGCGTGAC
 A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G A C G T A C G T
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Tcfl5/MA0632.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CGCDGGSYGCGGG--
-----GGCACGTGCC
 A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGCDGGSYGCGGG----
------GGGCGGGAAGG
 A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCDGGSYGCGGG--
---TGCCCNGGGGCA
 A T G C A C T G A G T C C G A T A C T G A T C G A T G C G A T C A T C G A G T C A C T G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A