Information for 12-TCATCCAACA (Motif 22)

A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C T G C G T A
p-value:1e-5
log p-value:-1.348e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 27.1bp
Average Position of motif in Background31.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCATCCAACA-
GYCATCMATCAT
 A C G T A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCATCCAACA
TCATCAATCA
 A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCCAACA--
CCATCAATCAAA
 A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A A C G T A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATCCAACA
ATAATCCC---
 A C G T A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATCCAACA
ATCACCCCAC-
 A C G T A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCATCCAACA
GTCATN-----
 A C G T A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCATCCAACA-------
TCACCCATCAATAAACA
 A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCATCCAACA
RGCCATYAATCA
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCATCCAACA
CNGTCACGCCAC-
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCATCCAACA
TTAATCCC---
 A C G T A C G T A G T C C G T A A C G T A G T C A G T C C G T A C G T A A G T C C G T A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T