Information for 13-CGCGGCAATTGCC (Motif 21)

A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C T G A G T C A C T G
p-value:1e-5
log p-value:-1.365e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 28.0bp
Average Position of motif in Background55.5 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0024.1_Dlx5/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCAATTGCC--
NANNGNTAATTACCNN
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

PH0009.1_Bsx/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCGGCAATTGCC----
-CAGGTAATTACCTCAG
 A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCGGCAATTGCC-
--TGGCACGTGCCA
 A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCGGCAATTGCC-
--CGGCACGTGCCA
 A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T
A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGCGGCAATTGCC
---GGGAATTTCC
 A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCGGCAATTGCC
GGCGGGAAAH---
 A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCAATTGCC--
ATNNACTAATTACTTT
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T

PH0109.1_Nkx1-1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCAATTGCC---
NCCCACTAATTAGCGCA
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCGGCAATTGCC--
CACGGCAGTTGGTNN
 A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGCGGCAATTGCC
---GGGAATTTCC
 A G T C A C T G A G T C A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C