Information for 5-GGGGTCAGTGYCA (Motif 12)

A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
Reverse Opposite:
A C G T A T C G C T G A A T G C C G T A A G T C A C G T T A C G C T G A A G T C A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.837
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.1 +/- 23.3bp
Average Position of motif in Background49.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAGTGYCA
GGCGAGGGGTCAAGGGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAGTGYCA
CTCCAGGGGTCAATTGA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGGTCAGTGYCA
AGRGGTCA------
 A C G T A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGTCAGTGYCA
NTNNNGGGGTCANGNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAGTGYCA
AGAGCGGGGTCAAGTA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGGGTCAGTGYCA
CGCGCCGGGTCACGTA--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGGTCAGTGYCA-
NAGGTCANTGACCT
 A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGGTCAGTGYCA
-AGGTCAAGGTCA
 A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGGGTCAGTGYCA
NTNTGGGGGGTCNNNA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGGGTCAGTGYCA-
--RGTTAGTGCCCY
 A C T G A C T G C T A G A C T G A G C T A G T C C G T A C T A G A C G T A T C G A G C T A T G C C G T A A C G T
A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T