Information for 4-CATTAATGCC (Motif 9)

G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C
Reverse Opposite:
A C T G A T C G A G T C C G T A A C G T C G A T C G T A G C T A A C G T A C T G
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.861
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.1 +/- 30.3bp
Average Position of motif in Background60.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CATTAATGCC
CACTAATT--
 G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CATTAATGCC-
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CATTAATGCC----
NNAATTAATGACCNNN
 A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CATTAATGCC----
GANNATTAATCCCTNNN
 A C G T A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATTAATGCC----
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATTAATGCC----
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CATTAATGCC---
ACATTCATGACACG
 A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Hoxd8/MA0910.1/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CATTAATGCC--
TAAATAATTAATGGCTA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CATTAATGCC--
TAAATAATTAATGGCTA
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0019.1_Dbx2/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CATTAATGCC-
NAATTAATTAATTNNN
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T C G A T C G T A C G T A A C G T A C T G A T G C G T A C A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A