Information for 3-AMYTCGCGTTCCC (Motif 5)

C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G T C A C G T A A G T C A C T G T G A C A C T G C G T A C T A G A C T G A C G T
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 26.9bp
Average Position of motif in Background61.6 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AMYTCGCGTTCCC---
------HTTTCCCASG
 C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AMYTCGCGTTCCC
NNAATTCTCGNTNAN
 A C G T A C G T C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AMYTCGCGTTCCC
---TKCTGTTCCA
 C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AMYTCGCGTTCCC---
TCTTTGGCGTACCCTAA
 A C G T C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

Ar/MA0007.3/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AMYTCGCGTTCCC
NGGTACACNGTGTTCCC
 A C G T A C G T A C G T A C G T C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AMYTCGCGTTCCC
---GCACGTACCC
 C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AMYTCGCGTTCCC-
NNGTCGCGTGNCAC
 C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AMYTCGCGTTCCC-----
--------TTCCCGCCWG
 C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AMYTCGCGTTCCC
AGTATTCTCGGTTGC
 A C G T A C G T C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AMYTCGCGTTCCC------
---GGGTGTGCCCAAAAGG
 C G T A G T A C A G T C A C G T A G T C A C T G A G T C C T A G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G