Information for 9-CATCGCTTGC (Motif 19)

A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A G C T A A C T G A T G C A C T G C G T A A G C T A C T G
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.853
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.7 +/- 25.0bp
Average Position of motif in Background47.7 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATCGCTTGC--
CTGCGCATGCGC
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CATCGCTTGC---
--GCGCCTGCGCA
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Hes1/MA1099.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATCGCTTGC-
-NNCGCGTGNN
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T
A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATCGCTTGC
---TGCGTG-
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATCGCTTGC----
--GCGCATGCGCAC
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATCGCTTGC--
--TTGCGTGCVA
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATCGCTTGC---
NNGTCGCGTGNCAC
 A C G T A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CATCGCTTGC---
--NNACTTGCCTT
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CATCGCTTGC
--TCACGTGC
 A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C
A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CATCGCTTGC---
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T A G T C C T G A G C A T A G T C A T C G A G T C C A G T A C G T A T C G A G T C A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G