Information for 6-GTCGCCAGCT (Motif 16)

T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T
Reverse Opposite:
C G T A A T C G A T G C C G A T C A T G A T C G A T G C C T A G C G T A A G T C
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.658
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif440.5
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets47.9 +/- 25.0bp
Average Position of motif in Background52.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GTCGCCAGCT----
----CCAGCTGTTN
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCGCCAGCT--
GCCGCCATCTTG
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GTCGCCAGCT----
----HCAGCTGDTN
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTCGCCAGCT---
---GCCATCTGTT
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTCGCCAGCT-----
---GCCAGCTGBTNB
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTCGCCAGCT---
--NNGCAGCTGTC
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTCGCCAGCT--
--CAGCAGCTGN
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCGCCAGCT
CGTGCCAAG-
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCGCCAGCT---
--NNGCAGCTGTT
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T A C G T A C G T A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCGCCAGCT
--TGCCAA--
 T C A G G C A T G A T C T A C G T A G C G T A C G C T A T A C G T A G C G C A T
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T